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  • Title

    Improving subsidence and carbon emissions modeling

    Lead Hydrofocus Inc.
    Description

    On-going subsidence of organic soils threatens the physical structure of the Delta, its central role in the state’s water system, many diverse species that depend on it, and threatens future agricultural production. Knowledge of baseline emissions and subsidence rates is important for developing alternative land use scenarios for maximizing benefits for sequestering carbon, reducing or reversing subsidence, providing income for landowners via the carbon market, and reducing flood risk. This project will gather, process, and analyze recent data in the Delta for land-surface elevation changes, greenhouse gas fluxes measured by eddy covariance and gas chambers, soil organic matter content, depth-to-groundwater, and soil organic thickness. These data will be used to update and calibrate the SUBCALC model and refine model inputs to improve the model’s ability to simulate subsidence and CO2 emissions. Collaboration with the Jet Propulsion Laboratory and UC Berkeley will allow use of CO2 flux and InSAR data to calibrate and validate the SUBCALC model. The Delta Conservancy is another partner assisting with assessment of modeling for land-use conversion planning. TNC and Metropolitan Water District are partners to assist with use of SUBCALC for engagement of the carbon market and collaborate with the Suisun RCD to improve estimates of subsidence and CO2 emissions.

    Science topics Carbon, Carbon storage, Greenhouse gas GHG, Subsidence
    Updated November 6, 2025
  • Title

    Development and maintenance of SacPAS website and research for management of Central Valley salmon and other fish species

    Lead University of Washington [UW]
    Description

    SacPAS serves to provide information integration services to the Central Valley Project Improvement Act and practitioners working on matters related to ESA-listed fishes. The web-based services relate fish passage to environmental conditions and provide resources for evaluating the effects of river management and environmental conditions on salmon passage and survival.

    The work performed as part of this agreement includes developing, maintaining, and making accessible query tools and decision support tools to access: historical, real-time and forecasted data; data summaries and visualizations; and hindcasts, forecasts, and scenario-derived predictions from statistical and mechanistic models. More specifically, the objectives are to: 

    1)    Maintain and extend a secondary data repository of historical, real-time, and forecasted fish, environmental, and operational data from the Sacramento River and other river systems in the Central Valley, integrated from primary, public databases. 

    2)    Maintain and improve the data query and visualization tools and services provided through the SacPAS website (https://www.cbr.washington.edu/sacramento/) for historical, real-time, and forecasted environmental and fish data.

    3)    Conduct research and provide access to modeling tools for fish survival and migration, through the SacPAS website, in support of Reclamation-funded and ESA-mandated activities, especially in efforts to predict, track, and evaluate the efficacy of proposed or actual actions.
     

    Science topics Chinook Salmon, Delta Smelt, Endangered species, Environmental drivers, Fish, Flows, Green sturgeon, Longfin Smelt, Salmon migration, Stage, Steelhead Trout, Sturgeon, Temperature, Velocity, Water, Water intakes and fish screens and passage, Water management, Water operations and exports, Water storage, Water temperature, White Sturgeon
    Updated March 25, 2025
  • Title

    Earth Observations to Combat Invasive Aquatic Vegetation

    Lead University of California - Merced [UC Merced]
    Description

    Invasive aquatic vegetation (IAV) is a threat to aquatic ecosystems worldwide, leading to a major loss of biodiversity and extensive damages and costs to human uses of those ecosystems. The Sacramento-San Joaquin River Delta (the “Delta”) is the hub of California’s water system, supporting over 35 million water users and a $54 billion agricultural industry. The Delta reform act mandates management decisions meet both water supply needs while maintaining the ecological function of the system. The Delta is a global biodiversity hotspot, and the focal point of $750-$950 million in restoration. It has also been called one of the most invaded estuaries in the world. Over the past 15 years, submerged and floating IAV have more than doubled in extent, threatening water supply and ecosystem health of the Delta. There is mounting evidence that herbicide treatments are not effective, and that water management actions, and wetland restoration may be having huge impacts on IAV. This presents both a risk to increasing IAV, but also an opportunity to prevent and even  effectively combat IAV through considered water management actions and better restoration planning, meeting the state’s co-equal goals of water security and Delta ecosystem conservation.

    This project will meet the needs of multiple state agencies by advancing operational Earth observation-based monitoring program for community-level submerged aquatic vegetation (SAV) and genus-level floating aquatic vegetation (FAV) and modeling tools to enable the Delta management community to assess the effect of previous management actions on IAV and forecast the effects of future actions to inform multi-agency decision making. Specifically, this work will 1) Operationalize IAV class mapping using Sentinel-2 satellite imagery, 2) Finalize and validate species distribution Models (SDM) for SAV community and FAV at genus-level to assess the impacts of previous water actions on IAV and predict IAV distribution in future scenarios, 3) Co-design IAV-based performance metrics to inform future actions.

    The proposed project fills a critical data gap in monitoring for state and federal agencies and stakeholders by implementing the first sustainable mapping effort for IAV. Monthly and seasonal estimates of SAV and FAV coverage will enable the Delta Stewardship Council to improve their performance metrics for evaluation of the Delta Plan and will help the Interagency Ecological Program assess whether management is meeting the co-equal goals for the Delta. Species distribution models will enable Department of Water Resources to evaluate how previous restoration flow actions have affected the spread and persistence of IAV and incorporate what they learn into future Structured Decision Making to better account for negative consequences of IAV when setting future restoration targets and implementing actions.

    Science topics Aquatic vegetation, Emergent macrophytes, Floating aquatic vegetation, Habitat restoration, Invasive and non native species, Monitoring methods and techniques, Other species, Remote sensing, Saltwater and freshwater marshes, SAV and FAV, Submerged aquatic vegetation, Tidal wetlands, Water hyacinth, Wetland mapping, Wetlands
    Updated December 11, 2025
  • Title

    Ecosystem Engineering Impacts of Water Primrose in the Delta

    Lead University of California - Merced [UC Merced]
    Description

    Water primrose (Ludwigia spp.) is a highly invasive, non-native floating macrophyte in the Delta. In recent years, water primrose has extended its niche into marsh habitat, causing extensive mortality of marsh macrophytes including tules and cattails. The goal of this project is to determine whether the growth strategy of water primrose, its allelopathic properties, or factors related to plant community structure are the cause of marsh loss following water primrose invasion in the Delta. Part of this study will identify and map the marshes most vulnerable to loss and quantify the spatial trajectory of marsh loss during the past 15 years. The ultimate benefit will be an improved understanding of the water primrose invasion processes in the Delta, which can be used to prioritize herbicide treatment of this highly invasive plant in marshes most vulnerable to invasion and with the highest habitat value.

    Objectives:

    1. Determine which water primrose functional traits are the likely cause of marsh loss in the Delta.
    2. Determine the effect(s) of community structure on water primrose invasion success and occurrence of marsh loss.
    3. Quantify the amount and spatial trajectory of marsh loss due to primrose invasion from 2004 - 2019.
    4. Identify and map the marshes that are most vulnerable to loss due to water primrose invasion in the Delta.
    5. Disseminate findings to relevant state agencies and additional stakeholders to ensure habitat restoration success and sustainability, and to focus resources on controlling water primrose in marshes most vulnerable to loss and of highest habitat value.

     

    Science topics Aquatic vegetation, Emergent macrophytes, Environmental drivers, Floating aquatic vegetation, Habitat, Habitat restoration, Intertidal and transition zones, Invasive and non native species, Landscape change, Landscape metrics, Remote sensing, Residence time, Resilience, Restoration, SAV and FAV, Submerged aquatic vegetation, Tidal wetlands, Wetlands
    Updated December 11, 2025