Science activity #52291,
updated 8 May 2024
Identification of environmental conditions driving cyanobacterial multi-species blooms and their toxicity using genome resolved metagenomics
Description / purpose
In recent years the Sacramento-San Joaquin Delta has seen an increase in toxigenic cyanobacterial diversity and abundance during harmful cyanobacterial bloom events (cyanoHABs). This increased cyanobacterial diversity parallels an increase in the number of detected toxins during cyanoHABs outside of the typical microcystins that have been previously identified. Currently there are critical knowledge gaps around the full toxigenic potential of rising diversity of cyanobacterial species, and how the total microbial community of cyanoHABs interacts within itself and with external abiotic factors in ways that may promote the expansion of new and diverse cyanoHABs.
The goal of this study is to use genome-resolved metagenomics to study the genetic diversity and metabolic and toxigenic potential of cyanoHABs to i) identify cyanobacterial taxa composition and their potential for toxins biosynthesis ii) characterize species succession dynamics and metabolic processes of the full microbial community during cyanobacterial bloom phases, iii) correlate environmental factors and toxin titers with biological components of diverse bloom phases to explain the development of cyanobacterial multi-species dominated bloom.
Linked science activities
None specifiedCollaborators
Andreja Kust, Principal investigator -
University of California - Berkeley [UC Berkeley]
Jillian Banfield, Co-investigator -
University of California - Berkeley [UC Berkeley]
Activity status
- 1 Awarded / Initiating (2022)
- 2 In progress / Ongoing (2022 - 2024)
- 3 Complete
Funding summary
Total allocated funding: $241,410
Label | Value |
---|---|
Contract # or labor code | 21045 |
Implementing organization | University of California - Berkeley [UC Berkeley] |
Funding organization | Delta Stewardship Council |
Funding Source | Delta Stewardship Council - General Fund |
Date of award | 2022-08-01 |
Date of fiscal year-end | 2023-06-30 |
Total award amount | $241,410 |
State type of obligation | Not provided |
Federal type of obligation | Not provided |
Reimbursability | Not provided |
Procurement mechanism | Contracted competitive or direct award |
Location
Subbasins
Delta regions
Geographic tags
None specified
Products and outputs
None provided
Type and context
Science action area
Management themes
Science themes
Types
Science functions
Management actions
None specified
Science Topics
Lead implementing organization
Partner implementing organizations
None specified