Science activities

Reset filters

8 records


















Records

Currently, sorted by last updated
Download
  • Title

    Low-Cost Satellite Remote Sensing of the Sacramento-San Joaquin Delta to Enhance Mapping for Invasive and Native Aquatic Vegetation

    Lead University of California - Davis [UC Davis]
    Description Invasive aquatic vegetation (IAV) acts as an ecosystem engineer by changing habitat conditions and water quality. This negatively affects the survival of native species. Over the past 15 years, IAV has more than doubled its footprint in the Sacramento-San Joaquin Delta waterways. The State of California spends millions of dollars each year to control IAV in the Delta-Suisun region and costs are likely to continue to rise. Gaining a better understanding of the spread, life history characteristics, and potential vulnerabilities of these species can lead to more effective control strategies. The recent launch of the Sentinel-2 satellite can fill temporal gaps left by annual airborne surveys. This study will create a data pipeline for sustained, low-cost satellite-based monitoring of aquatic and marsh vegetation year-round. To quantify one of the Delta Plan performance measures, the time and degree of floodplain inundation for the Yolo Bypass will be measured. This study will result in new metrics to measure progress toward habitat goals in several restoration sites.
    Science topics Aquatic vegetation, Invasive and non native species
    Updated March 2, 2026
  • Title

    Yolo Bypass Fish Monitoring

    Lead California Department of Water Resource [DWR]
    Description California Department of Water Resources (DWR) has operated a fisheries monitoring program in the Yolo Bypass, a seasonal floodplain and tidal slough, since 1998. The objectives of the Yolo Bypass Fish Monitoring Program (YBFMP) are to: (1) collect baseline data on lower trophic levels (phytoplankton, zooplankton, and aquatic insects), juvenile fish and adult fish, hydrology, and water quality parameters;(2) investigation of the temporal and seasonal patterns in chlorophyll-a concentrations, including whether high concentrations are exported from the Bypass during agricultural and natural flow events and the possibility of manipulating bypass flows to benefit listed species like Delta Smelt (Hypomesus transpacificus) and Chinook salmon (Oncorhynchus tshawytscha). The YBFMP operates a rotary screw trap and fyke trap, and conducts biweekly beach seine and lower trophic surveys in addition to maintaining water quality instrumentation in the bypass. The YBFMP serves to fill information gaps regarding environmental conditions in the bypass that trigger migrations and enhanced survival and growth of native fishes, as well as provide data for IEP synthesis efforts.
    Science topics Chinook Salmon, Chlorophyll A B, Conductivity, Delta Smelt, Direction, Dissolved oxygen, Endangered species, Fish, Flood, Food webs, Green sturgeon, Habitat, Habitat restoration, Insects, Intertidal and transition zones, Invasive and non native species, Invertebrates, Longfin Smelt, Main channels, Nitrogen, Nitrogen and ammonia, Nutrients, Other species, Other zooplankton, Pelagic fish, pH, Phytoplankton, Primary production, Sacramento Splittail, Salmon migration, Salmon rearing, Saltwater and freshwater marshes, SAV and FAV, Seasonally flooded, Solar irradiance, Stage, Steelhead Trout, Striped bass, Sturgeon, Submerged aquatic vegetation, Surface water flow, Tides, Turbidity, Velocity, Water, Water temperature, Wetlands, White Sturgeon, Zooplankton
    Updated August 28, 2024
  • Title

    Fish Restoration Program Monitoring

    Lead California Department of Fish and Wildlife [CDFW]
    Description

    Description

    The CDFW Fish Restoration Program will collect fish and invertebrate data near existing and planned tidal wetlands. These data will provide information on how fish and invertebrate communities change pre-/post-restoration. While collecting these data, the variability of invertebrate catches will be assessed for each gear type to determine the optimal number of samples per sampling site.

    Need

    Under the 2008, 2019, 2024 State Water Project/Central Valley Project Joint Operations Biological Opinion from United States Fish and Wildlife Service, 2009, 2019, 2024 National Marine Fisheries Service, and 2009, 2020, and 2024 State Water Project Incidental Take Permit, Department of Water Resources (DWR) is required to restore >8,000 acres of tidal wetlands in the Sacramento-San Joaquin Delta (Delta) and Suisun Marsh to improve habitat and food web resources for threatened fishes. The Fish Restoration Program is responsible for biological monitoring in these restored tidal habitats to assess their success for providing habitat and food web benefits for at-risk native fishes.

    Project Objectives

    Assess the food web resources (nutrients, phytoplankton, zooplankton, and macroinvertebrates) associated with pre- and post-restoration tidal wetlands, as well as with existing reference wetlands

    Assess the fish community of restoring wetlands including use by rearing salmonids and characterization of the predator and competitor communities

    Science topics Algae, Aquatic vegetation, Benthic, Bivalve, Chinook Salmon, Chlorophyll A B, Crustaceans, Delta Smelt, Dissolved oxygen, Fish, Food webs, Green sturgeon, Habitat restoration, Insects, Invertebrates, Longfin Smelt, Mollusks, Nitrogen and ammonia, Nutrients, Other zooplankton, pH, Phosphorous, Phytoplankton, Sacramento Splittail, Salinity, Salmon rearing, Saltwater and freshwater marshes, Steelhead Trout, Submerged aquatic vegetation, Tidal wetlands, Turbidity, Water temperature, White Sturgeon, Zooplankton
    Updated May 6, 2026
  • Title

    Remote sensing of the Sacramento-San Joaquin Delta to enhance mapping for invasive and native aquatic plant species

    Lead University of California - Davis [UC Davis]
    Description

    Invasive aquatic vegetation (IAV) is widespread in the Sacramento-San Joaquin Delta (Delta) and its change in coverage has been mapped at the species level using spectroscopy data collected once a year, from 2004 to 2008 and from 2014 to 2019. There was no funding to conduct a similar mapping campaign in 2020. This work aims to collect and analyze imagery in summer of 2020 to fulfill two main objectives. First is to inform the monitoring framework for aquatic vegetation put forth for the Interagency Ecological Program (IEP). Comparing spring and fall imagery of 2019 and the summer imagery of 2020, the project will evaluate which time period is ideal for optimal mapping of aquatic vegetation considering the logistical challenges of airborne imagery acquisition and the phenology of the species being mapped. The project will also contrast the pros and cons of the 3 proposed scenarios in the IEP monitoring framework: 1) two hyperspectral acquisitions a year (2019; “best case” scenario), 2) one acquisition a year (2020, “moderate” scenario) and 3) satellite
    data based monitoring (the Sentinel-2 study, “bare bones” scenario). The second objective of the project is to determine if the new treatment framework (new herbicide formulations and application schedules) is effective in controlling the old (Brazilian waterweed, water hyacinth) and newly added target weed species (water primrose, alligator weed) in the Delta ecosystem. 

    Science topics Brazilian waterweed, Invasive and non native species, Remote sensing, Water hyacinth
    Updated February 27, 2025
  • Title

    Earth Observations to Combat Invasive Aquatic Vegetation

    Lead University of California - Merced [UC Merced]
    Description

    Invasive aquatic vegetation (IAV) is a threat to aquatic ecosystems worldwide, leading to a major loss of biodiversity and extensive damages and costs to human uses of those ecosystems. The Sacramento-San Joaquin River Delta (the “Delta”) is the hub of California’s water system, supporting over 35 million water users and a $54 billion agricultural industry. The Delta reform act mandates management decisions meet both water supply needs while maintaining the ecological function of the system. The Delta is a global biodiversity hotspot, and the focal point of $750-$950 million in restoration. It has also been called one of the most invaded estuaries in the world. Over the past 15 years, submerged and floating IAV have more than doubled in extent, threatening water supply and ecosystem health of the Delta. There is mounting evidence that herbicide treatments are not effective, and that water management actions, and wetland restoration may be having huge impacts on IAV. This presents both a risk to increasing IAV, but also an opportunity to prevent and even  effectively combat IAV through considered water management actions and better restoration planning, meeting the state’s co-equal goals of water security and Delta ecosystem conservation.

    This project will meet the needs of multiple state agencies by advancing operational Earth observation-based monitoring program for community-level submerged aquatic vegetation (SAV) and genus-level floating aquatic vegetation (FAV) and modeling tools to enable the Delta management community to assess the effect of previous management actions on IAV and forecast the effects of future actions to inform multi-agency decision making. Specifically, this work will 1) Operationalize IAV class mapping using Sentinel-2 satellite imagery, 2) Finalize and validate species distribution Models (SDM) for SAV community and FAV at genus-level to assess the impacts of previous water actions on IAV and predict IAV distribution in future scenarios, 3) Co-design IAV-based performance metrics to inform future actions.

    The proposed project fills a critical data gap in monitoring for state and federal agencies and stakeholders by implementing the first sustainable mapping effort for IAV. Monthly and seasonal estimates of SAV and FAV coverage will enable the Delta Stewardship Council to improve their performance metrics for evaluation of the Delta Plan and will help the Interagency Ecological Program assess whether management is meeting the co-equal goals for the Delta. Species distribution models will enable Department of Water Resources to evaluate how previous restoration flow actions have affected the spread and persistence of IAV and incorporate what they learn into future Structured Decision Making to better account for negative consequences of IAV when setting future restoration targets and implementing actions.

    Science topics Aquatic vegetation, Emergent macrophytes, Floating aquatic vegetation, Habitat restoration, Invasive and non native species, Monitoring methods and techniques, Other species, Remote sensing, Saltwater and freshwater marshes, SAV and FAV, Submerged aquatic vegetation, Tidal wetlands, Water hyacinth, Wetland mapping, Wetlands
    Updated February 7, 2026
  • Title

    Ecosystem Engineering Impacts of Water Primrose in the Delta

    Lead University of California - Merced [UC Merced]
    Description

    Water primrose (Ludwigia spp.) is a highly invasive, non-native floating macrophyte in the Delta. In recent years, water primrose has extended its niche into marsh habitat, causing extensive mortality of marsh macrophytes including tules and cattails. The goal of this project is to determine whether the growth strategy of water primrose, its allelopathic properties, or factors related to plant community structure are the cause of marsh loss following water primrose invasion in the Delta. Part of this study will identify and map the marshes most vulnerable to loss and quantify the spatial trajectory of marsh loss during the past 15 years. The ultimate benefit will be an improved understanding of the water primrose invasion processes in the Delta, which can be used to prioritize herbicide treatment of this highly invasive plant in marshes most vulnerable to invasion and with the highest habitat value.

    Objectives:

    1. Determine which water primrose functional traits are the likely cause of marsh loss in the Delta.
    2. Determine the effect(s) of community structure on water primrose invasion success and occurrence of marsh loss.
    3. Quantify the amount and spatial trajectory of marsh loss due to primrose invasion from 2004 - 2019.
    4. Identify and map the marshes that are most vulnerable to loss due to water primrose invasion in the Delta.
    5. Disseminate findings to relevant state agencies and additional stakeholders to ensure habitat restoration success and sustainability, and to focus resources on controlling water primrose in marshes most vulnerable to loss and of highest habitat value.

     

    Science topics Aquatic vegetation, Emergent macrophytes, Environmental drivers, Floating aquatic vegetation, Habitat, Habitat restoration, Intertidal and transition zones, Invasive and non native species, Landscape change, Landscape metrics, Remote sensing, Residence time, Resilience, Restoration, SAV and FAV, Submerged aquatic vegetation, Tidal wetlands, Wetlands
    Updated December 11, 2025
  • Title

    Delta Invasive Species Symposium

    Lead Delta Interagency Invasive Species Coordination Team [DIISCT]
    Description

    Since 2015, the DIISC Team has organized a biennial Delta Invasive Species Symposium. The symposium is a forum for Delta managers, researchers, and decision-makers to meet, share and synthesize information, and communicate best practices and lessons learned. https://deltaconservancy.ca.gov/diisc-team-activities/

    Science topics None specified
    Updated April 16, 2026
  • Title

    Submersed aquatic vegetation in the Delta: composition, probability distribution and response to climatic factors

    Lead California Department of Fish and Wildlife [CDFW]
    Description

    Description

    Invasive submerged aquatic species (SAV) greatly impact habitat for endangered species in the Delta. In the past decade, we have seen a huge increase in SAV cover and an influx of new invasive species like ribbonweed. This study will build species distribution models (SDM) for SAV using predictors such as water speed, depth, salinity from the UnTRIM hydrodynamic model, turbidity derived from Sentinel-2 and temperature derived from ECOSTRESS satellite imagery. The SDMs will be used to study the effect of flow management actions and restoration activities on SAV distribution. SAV community data collected in the field (available on EDI) will be analyzed to study if the SAV community composition has changed from 2007-08 to present time. The same dataset will be used to explore if the SAV SDM can be refined based on species presence data to see if there are significant differences in SDMs of individual SAV species.

    Need

    Invasive aquatic vegetation has been identified as a major concern in the IEP Science Strategy document and a topic meriting more study. Assessing the effects of flow alteration management actions on the Delta is also a recommended key topic of research. This study furthers both these objectives. It complements ongoing projects such as the water primrose ecoengineering project (PEN #348), which is similarly building an SDM for Ludwigia spp., determining plant characteristics that enable Ludwigia invasion and mapping invasion risk for the remnant Delta marshes. The work also builds off the conclusions of the Sentinel project which mapped the temporal phenological signal of SAV in the Delta. The results of this study will help design restorations to be more resistant to invasion, plan for climate change impacts, and predict invasion risk in Delta regions that are being reconnected tidally to the Delta waterways network through current and future restoration projects.

    Objectives

    • Which environmental factors and habitat characteristics are associated with SAV?
    • What is the SAV community structure and has it shifted since 2007?
    • Is there sufficient data to determine SAV species-specific SDM within the SAV community SDM? How different are SDMs of individual species?
    • How might climate change alter the distribution of SAV species and assemblages into the future?  Will future conditions constrain or expand SAV distribution? Can we simulate SAV distribution under other scenarios such as ecorestore projects?
    Science topics Aquatic vegetation
    Updated May 11, 2026