Science activity #49862,
updated 29 November 2022
An Improved Genomics Tool for Characterizing Life History Diversity and Promoting Resilience in Central Valley Chinook Salmon
Description / purpose
This study will improve our ability to protect the diversity of traits in Chinook salmon. The diversity of Chinook salmon migration timing is decreasing in the Central Valley. A key roadblock to protecting diversity is the current inability to rapidly and inexpensively identify large numbers of individuals from different populations during their migration to the ocean.
This study addresses this information gap by leveraging pre-existing genomic data to develop a new technique that will allow scientists to identify individuals to life history type and location. For example, this study will potentially be able to identify Fall Run Chinook that are from the Sacramento versus the San Joaquin River basins. This information, in combination with data on water temperature and river flows, can determine the relationship between environmental conditions and juvenile salmon life history diversity. The information generated by this work will provide managers with the ability to accurately monitor the effect of key management actions on the different Central Valley Chinook salmon populations.
Linked science activities
None specifiedCollaborators
Mariah Meek, Principal investigator -
Michigan State University
Tasha Thompson, Contributor -
Michigan State University
Shannon O'Leary, Contributor -
Michigan State University
Melinda Baerwald, Contributor -
California Department of Water Resource [DWR]
Pascale Goertler, Contributor -
Delta Stewardship Council
Activity status
- 1 Awarded / Initiating (2019)
- 2 In progress / Ongoing (2019 - 2022)
- 3 Complete
Funding summary
Total allocated funding: $632,909
Label | Value |
---|---|
Contract # or labor code | 18209 |
Implementing organization | Michigan State University |
Funding organization | Delta Stewardship Council |
Funding Source | Delta Stewardship Council - General Fund |
Date of award | 2019-06-30 |
Date of fiscal year-end | Not provided |
Total award amount | $632,909 |
State type of obligation | Not provided |
Federal type of obligation | Not provided |
Reimbursability | Not provided |
Procurement mechanism | Contracted competitive or direct award |
Annual expenditures |
2019 - $394831.00 2020 - $238077.00 |
Location
Subbasins
Delta regions
Geographic tags
None specified
Products and outputs
Type | Title | Description | Views |
---|---|---|---|
An Improved Genomics Tool for Characterizing Life History Diversity and Promoting Resilience in Central Valley Chinook Salmon | screenshot of a web-based summary of the project | 0 | |
Closing the Loop on Science Funding | In 2018, under the leadership of then Delta Lead S | 1 | |
Every cog and wheel: Unraveling biocomplexity at the genomic and phenotypic level in a population complex of Chinook salmon | Genomic diversity is the fundamental building bloc | 3 | |
Delta Breeze: May 2022 | The Science Action Agenda in Practice: Competitive | 0 |
Type and context
Science action area
SAA Action Area 3 (2017-2021): Develop tools and methods to support and evaluate habitat restoration
,
SAA Action Area 5 (2017-2021): Modernize monitoring, data management, and modeling
Management themes
Science themes
Types
Science functions
Management actions
Habitat protection / enhancement / restoration
,
Improving methods and/or infrastructure for science and monitoring