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  • Title

    Predation Dynamics Across Reach-Specific Gradients in Juvenile Salmon Survival

    Lead U.S. Geological Survey [USGS]
    Description

    Description The overarching goal of this project is to determine if predation by piscivorous fishes is an important explanatory driver of survival of juvenile Chinook Salmon emigrating through the north Delta. To achieve this goal, we seek to determine if variation in reach-specific characteristics of predation dynamics covary with survival of acoustictagged juvenile Chinook Salmon collected during the study period. This will be accomplished by comparing reach-specific characteristics of the piscivore community and its observed and modeled consumption of juvenile Chinook Salmon across a range of environmental conditions. Need This is not a mandated study but it addresses an important research need. Objectives: How does the piscivore community (species composition, size structure, and abundance) vary across specific migratory pathways (river reaches) in the North Delta? To what extent do environmental conditions (e.g., water temperature, turbidity, and discharge) control the consumption of juvenile Chinook Salmon? Do characteristics of the predator community explain variation in survival of acoustic tagged salmon collected during the study period?

    Science topics Predation
    Updated November 12, 2025
  • Title

    Extracting Better Information from Long-Term Monitoring Data: Estimating Occupancy and Abundance of Near-Shore Fishes in the Sacramento-San Joaquin River Delta

    Lead U.S. Fish and Wildlife Service [USFWS]
    Description

    Description The purpose of this study is to expand IEP monitoring and inference to other dominant near-shore, littoral habitats not sampled by beach seines through the use of boat electrofishing. To accomplish this we will sample key littoral fish species across various near-shore habitats in order to determine how best to estimate abundance, occupancy, capture probabilities, and related environmental drivers. Need Expanding DJFMP sampling to other habitats throughout the Delta will allow our program to detect and monitor fishes and ecological trends through time, alleviating a recognized data gap. Current sampling relies on data collected through non-random fixed point sampling of unobstructed habitats, which limits the utility of our data to inform management decision. Objectives • Design boat electrofishing survey methods to expand DJFMP’s monitoring into habitats and locations not sampled by beach seining. • Design and develop field and data analysis methods for estimating capture probability and abundance using boat electrofishing techniques. • Predict spatio-temporal distribution of habitats occupied by key littoral species.

    Science topics Habitat
    Updated April 24, 2025
  • Title

    Continuous Flow and Water Quality Monitoring Network in the Sacramento-San Joaquin Delta

    Lead U.S. Geological Survey [USGS]
    Description This project advances the integration of high-frequency monitoring of flow, water quality (including chlorophyll and nutrients), suspended sediment, and biological responses at key locations throughout the Delta and Suisun Bay. Data collected by the fixed-station network provide critical information on the physical and chemical conditions that drive habitat quality and ecosystem responses targeted by management actions. Enhanced monitoring of nutrients and phytoplankton at selected stations improves understanding of how hydrodynamics, water quality, and landscape features influence primary productivity and food-web dynamics. These measurements help identify factors affecting food quantity and quality, as well as conditions that may promote harmful algal blooms and toxin production. This work is supported by several integrated teams: • Hydrodynamics Team – Fixed-station network operation and maintenance; monitoring of flow, velocity, water level, and core water-quality parameters. • Biogeochemistry Team – Fixed-station network operation and maintenance; monitoring of expanded water-quality parameters, nutrients, and phytoplankton dynamics. • Bay Team – Fixed-station network operation and maintenance; monitoring of suspended sediment and water quality in San Francisco Bay.
    Science topics Chlorophyll A B, Conductivity, Dissolved oxygen, Flows, Nutrients, pH, Phytoplankton, Sediments, Stage, Surface water flow, Tides, Turbidity, Velocity, Water operations and exports, Water temperature
    Updated June 5, 2026